Inheritance diagram for aspect::MeshDeformation::Diffusion< dim >:

Public Member Functions
	Diffusion ()

void	initialize () override

void	update () override

void	compute_velocity_constraints_on_boundary (const DoFHandler< dim > &mesh_deformation_dof_handler, AffineConstraints< double > &mesh_velocity_constraints, const std::set< types::boundary_id > &boundary_id) const override

bool	needs_surface_stabilization () const override

void	parse_parameters (ParameterHandler &prm) override

Public Member Functions inherited from aspect::MeshDeformation::Interface< dim >
virtual Tensor< 1, dim >	compute_initial_deformation_on_boundary (const types::boundary_id boundary_indicator, const Point< dim > &position) const

Public Member Functions inherited from aspect::Plugins::InterfaceBase
virtual	~InterfaceBase ()=default

Public Member Functions inherited from aspect::SimulatorAccess< dim >
	SimulatorAccess ()

	SimulatorAccess (const Simulator< dim > &simulator_object)

virtual	~SimulatorAccess ()=default

virtual void	initialize_simulator (const Simulator< dim > &simulator_object)

const Introspection< dim > &	introspection () const

const Simulator< dim > &	get_simulator () const

const Parameters< dim > &	get_parameters () const

SimulatorSignals< dim > &	get_signals () const

MPI_Comm	get_mpi_communicator () const

TimerOutput &	get_computing_timer () const

const ConditionalOStream &	get_pcout () const

double	get_time () const

double	get_timestep () const

double	get_old_timestep () const

unsigned int	get_timestep_number () const

const TimeStepping::Manager< dim > &	get_timestepping_manager () const

unsigned int	get_nonlinear_iteration () const

const parallel::distributed::Triangulation< dim > &	get_triangulation () const

double	get_volume () const

const Mapping< dim > &	get_mapping () const

std::string	get_output_directory () const

bool	include_adiabatic_heating () const

bool	include_latent_heat () const

bool	include_melt_transport () const

int	get_stokes_velocity_degree () const

double	get_adiabatic_surface_temperature () const

double	get_surface_pressure () const

bool	convert_output_to_years () const

unsigned int	get_pre_refinement_step () const

unsigned int	n_compositional_fields () const

double	get_end_time () const

void	get_refinement_criteria (Vector< float > &estimated_error_per_cell) const

void	get_artificial_viscosity (Vector< float > &viscosity_per_cell, const bool skip_interior_cells=false) const

void	get_artificial_viscosity_composition (Vector< float > &viscosity_per_cell, const unsigned int compositional_variable) const

const LinearAlgebra::BlockVector &	get_current_linearization_point () const

const LinearAlgebra::BlockVector &	get_solution () const

const LinearAlgebra::BlockVector &	get_old_solution () const

const LinearAlgebra::BlockVector &	get_old_old_solution () const

const LinearAlgebra::BlockVector &	get_reaction_vector () const

const LinearAlgebra::BlockVector &	get_mesh_velocity () const

const DoFHandler< dim > &	get_dof_handler () const

const FiniteElement< dim > &	get_fe () const

const LinearAlgebra::BlockSparseMatrix &	get_system_matrix () const

const LinearAlgebra::BlockSparseMatrix &	get_system_preconditioner_matrix () const

const MaterialModel::Interface< dim > &	get_material_model () const

const GravityModel::Interface< dim > &	get_gravity_model () const

const InitialTopographyModel::Interface< dim > &	get_initial_topography_model () const

const GeometryModel::Interface< dim > &	get_geometry_model () const

const AdiabaticConditions::Interface< dim > &	get_adiabatic_conditions () const

bool	has_boundary_temperature () const

const BoundaryTemperature::Manager< dim > &	get_boundary_temperature_manager () const

const BoundaryHeatFlux::Interface< dim > &	get_boundary_heat_flux () const

bool	has_boundary_composition () const

const BoundaryComposition::Manager< dim > &	get_boundary_composition_manager () const

const BoundaryTraction::Manager< dim > &	get_boundary_traction_manager () const

std::shared_ptr< const InitialTemperature::Manager< dim > >	get_initial_temperature_manager_pointer () const

const InitialTemperature::Manager< dim > &	get_initial_temperature_manager () const

std::shared_ptr< const InitialComposition::Manager< dim > >	get_initial_composition_manager_pointer () const

const InitialComposition::Manager< dim > &	get_initial_composition_manager () const

const std::set< types::boundary_id > &	get_fixed_temperature_boundary_indicators () const

const std::set< types::boundary_id > &	get_fixed_heat_flux_boundary_indicators () const

const std::set< types::boundary_id > &	get_fixed_composition_boundary_indicators () const

const std::set< types::boundary_id > &	get_mesh_deformation_boundary_indicators () const

const BoundaryVelocity::Manager< dim > &	get_boundary_velocity_manager () const

const HeatingModel::Manager< dim > &	get_heating_model_manager () const

const MeshRefinement::Manager< dim > &	get_mesh_refinement_manager () const

const MeltHandler< dim > &	get_melt_handler () const

const VolumeOfFluidHandler< dim > &	get_volume_of_fluid_handler () const

const NewtonHandler< dim > &	get_newton_handler () const

const MeshDeformation::MeshDeformationHandler< dim > &	get_mesh_deformation_handler () const

const LateralAveraging< dim > &	get_lateral_averaging () const

const AffineConstraints< double > &	get_current_constraints () const

bool	simulator_is_past_initialization () const

double	get_pressure_scaling () const

bool	pressure_rhs_needs_compatibility_modification () const

bool	model_has_prescribed_stokes_solution () const

TableHandler &	get_statistics_object () const

const Postprocess::Manager< dim > &	get_postprocess_manager () const

unsigned int	n_particle_managers () const

const Particle::Manager< dim > &	get_particle_manager (const unsigned int particle_manager_index) const

Particle::Manager< dim > &	get_particle_manager (const unsigned int particle_manager_index)

bool	is_stokes_matrix_free ()

const StokesMatrixFreeHandler< dim > &	get_stokes_matrix_free () const

RotationProperties< dim >	compute_net_angular_momentum (const bool use_constant_density, const LinearAlgebra::BlockVector &solution, const bool limit_to_top_faces=false) const

Static Public Member Functions
static void	declare_parameters (ParameterHandler &prm)

Static Public Member Functions inherited from aspect::Plugins::InterfaceBase
static void	declare_parameters (ParameterHandler &prm)

Static Public Member Functions inherited from aspect::SimulatorAccess< dim >
static void	get_composition_values_at_q_point (const std::vector< std::vector< double >> &composition_values, const unsigned int q, std::vector< double > &composition_values_at_q_point)

Private Member Functions
void	diffuse_boundary (const DoFHandler< dim > &free_surface_dof_handler, const IndexSet &mesh_locally_owned, const IndexSet &mesh_locally_relevant, LinearAlgebra::Vector &output, const std::set< types::boundary_id > &boundary_id) const

void	check_diffusion_time_step (const DoFHandler< dim > &mesh_deformation_dof_handler, const std::set< types::boundary_id > &boundary_ids) const

Private Attributes
double	diffusivity

unsigned int	timesteps_between_diffusion

bool	apply_diffusion

std::set< types::boundary_id >	additional_tangential_mesh_boundary_indicators

Detailed Description

template<int dim>
class aspect::MeshDeformation::Diffusion< dim >

A plugin that computes the deformation of surface vertices according to the solution of a dim-1 diffusion problem.

Definition at line 45 of file diffusion.h.

Constructor & Destructor Documentation

§ Diffusion()

template<int dim>

aspect::MeshDeformation::Diffusion< dim >::Diffusion ( )

Member Function Documentation

§ initialize()

template<int dim>

void aspect::MeshDeformation::Diffusion< dim >::initialize ( )

overridevirtual

Initialize function, which sets the start time and start timestep of diffusion.

Reimplemented from aspect::Plugins::InterfaceBase.

§ update()

template<int dim>

void aspect::MeshDeformation::Diffusion< dim >::update ( )

overridevirtual

The update function sets the current time and determines whether diffusion should be applied in this timestep.

Reimplemented from aspect::Plugins::InterfaceBase.

§ compute_velocity_constraints_on_boundary()

template<int dim>

void aspect::MeshDeformation::Diffusion< dim >::compute_velocity_constraints_on_boundary	(	const DoFHandler< dim > &	mesh_deformation_dof_handler,
		AffineConstraints< double > &	mesh_velocity_constraints,
		const std::set< types::boundary_id > &	boundary_id
	)		const

overridevirtual

A function that creates constraints for the velocity of certain mesh vertices (e.g. the surface vertices) for a specific boundary. The calling class will respect these constraints when computing the new vertex positions.

Reimplemented from aspect::MeshDeformation::Interface< dim >.

§ needs_surface_stabilization()

template<int dim>

bool aspect::MeshDeformation::Diffusion< dim >::needs_surface_stabilization ( ) const

overridevirtual

Returns whether or not the plugin requires surface stabilization

Reimplemented from aspect::MeshDeformation::Interface< dim >.

§ declare_parameters()

template<int dim>

static void aspect::MeshDeformation::Diffusion< dim >::declare_parameters ( ParameterHandler & prm )

static

Declare parameters for the diffusion of the surface.

§ parse_parameters()

template<int dim>

void aspect::MeshDeformation::Diffusion< dim >::parse_parameters ( ParameterHandler & prm )

overridevirtual

Parse parameters for the diffusion of the surface.

Reimplemented from aspect::Plugins::InterfaceBase.

§ diffuse_boundary()

template<int dim>

void aspect::MeshDeformation::Diffusion< dim >::diffuse_boundary	(	const DoFHandler< dim > &	free_surface_dof_handler,
		const IndexSet &	mesh_locally_owned,
		const IndexSet &	mesh_locally_relevant,
		LinearAlgebra::Vector &	output,
		const std::set< types::boundary_id > &	boundary_id
	)		const

private

Compute the surface velocity from a difference in surface height given by the solution of the hillslope diffusion problem.

§ check_diffusion_time_step()

template<int dim>

void aspect::MeshDeformation::Diffusion< dim >::check_diffusion_time_step	(	const DoFHandler< dim > &	mesh_deformation_dof_handler,
		const std::set< types::boundary_id > &	boundary_ids
	)		const

private

Check that the size of the next time step is not larger than the conduction timestep based on the mesh size and the diffusivity on each cell along the surface. The computed time step has to satisfy the CFL number chosen in the input parameter file on each cell of the mesh.

Member Data Documentation

§ diffusivity

template<int dim>

double aspect::MeshDeformation::Diffusion< dim >::diffusivity

private

The hillslope transport coefficient or diffusivity [m2/s] used in the hillslope diffusion of the deformed surface.

Definition at line 117 of file diffusion.h.

§ timesteps_between_diffusion

template<int dim>

unsigned int aspect::MeshDeformation::Diffusion< dim >::timesteps_between_diffusion

private

Maximum number of steps between the application of diffusion.

Definition at line 122 of file diffusion.h.

§ apply_diffusion

template<int dim>

bool aspect::MeshDeformation::Diffusion< dim >::apply_diffusion

private

Whether or not in the current timestep, diffusion should be applied.

Definition at line 128 of file diffusion.h.

§ additional_tangential_mesh_boundary_indicators

template<int dim>

std::set<types::boundary_id> aspect::MeshDeformation::Diffusion< dim >::additional_tangential_mesh_boundary_indicators

private

Boundaries along which the mesh is allowed to move tangentially despite of the Stokes velocity boundary conditions.

Definition at line 134 of file diffusion.h.

The documentation for this class was generated from the following file:

/home/bob/source/include/aspect/mesh_deformation/diffusion.h

Public Member Functions

Static Public Member Functions

Private Member Functions

Private Attributes

Detailed Description

template<int dim> class aspect::MeshDeformation::Diffusion< dim >

Constructor & Destructor Documentation

§ Diffusion()

Member Function Documentation

§ initialize()

§ update()

§ compute_velocity_constraints_on_boundary()

§ needs_surface_stabilization()

§ declare_parameters()

§ parse_parameters()

§ diffuse_boundary()

§ check_diffusion_time_step()

Member Data Documentation

§ diffusivity

§ timesteps_between_diffusion

§ apply_diffusion

§ additional_tangential_mesh_boundary_indicators

template<int dim>
class aspect::MeshDeformation::Diffusion< dim >