Inheritance diagram for aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >:

Public Member Functions
void	initialize ()

virtual unsigned int	number_of_lookups () const

bool	is_compressible () const

void	evaluate (const MaterialModel::MaterialModelInputs< dim > &in, std::vector< MaterialModel::EquationOfStateOutputs< dim >> &eos_outputs) const

void	fill_additional_outputs (const MaterialModel::MaterialModelInputs< dim > &in, const std::vector< std::vector< double >> &volume_fractions, MaterialModel::MaterialModelOutputs< dim > &out) const

void	parse_parameters (ParameterHandler &prm)

void	create_additional_named_outputs (MaterialModel::MaterialModelOutputs< dim > &out) const

const MaterialModel::MaterialUtilities::Lookup::MaterialLookup &	get_material_lookup (unsigned int lookup_index) const

Public Member Functions inherited from aspect::SimulatorAccess< dim >
	SimulatorAccess ()

	SimulatorAccess (const Simulator< dim > &simulator_object)

virtual	~SimulatorAccess ()=default

virtual void	initialize_simulator (const Simulator< dim > &simulator_object)

const Introspection< dim > &	introspection () const

const Simulator< dim > &	get_simulator () const

const Parameters< dim > &	get_parameters () const

SimulatorSignals< dim > &	get_signals () const

MPI_Comm	get_mpi_communicator () const

TimerOutput &	get_computing_timer () const

const ConditionalOStream &	get_pcout () const

double	get_time () const

double	get_timestep () const

double	get_old_timestep () const

unsigned int	get_timestep_number () const

const TimeStepping::Manager< dim > &	get_timestepping_manager () const

unsigned int	get_nonlinear_iteration () const

const parallel::distributed::Triangulation< dim > &	get_triangulation () const

double	get_volume () const

const Mapping< dim > &	get_mapping () const

std::string	get_output_directory () const

bool	include_adiabatic_heating () const

bool	include_latent_heat () const

bool	include_melt_transport () const

int	get_stokes_velocity_degree () const

double	get_adiabatic_surface_temperature () const

double	get_surface_pressure () const

bool	convert_output_to_years () const

unsigned int	get_pre_refinement_step () const

unsigned int	n_compositional_fields () const

double	get_end_time () const

void	get_refinement_criteria (Vector< float > &estimated_error_per_cell) const

void	get_artificial_viscosity (Vector< float > &viscosity_per_cell, const bool skip_interior_cells=false) const

void	get_artificial_viscosity_composition (Vector< float > &viscosity_per_cell, const unsigned int compositional_variable) const

const LinearAlgebra::BlockVector &	get_current_linearization_point () const

const LinearAlgebra::BlockVector &	get_solution () const

const LinearAlgebra::BlockVector &	get_old_solution () const

const LinearAlgebra::BlockVector &	get_old_old_solution () const

const LinearAlgebra::BlockVector &	get_reaction_vector () const

const LinearAlgebra::BlockVector &	get_mesh_velocity () const

const DoFHandler< dim > &	get_dof_handler () const

const FiniteElement< dim > &	get_fe () const

const LinearAlgebra::BlockSparseMatrix &	get_system_matrix () const

const LinearAlgebra::BlockSparseMatrix &	get_system_preconditioner_matrix () const

const MaterialModel::Interface< dim > &	get_material_model () const

const GravityModel::Interface< dim > &	get_gravity_model () const

const InitialTopographyModel::Interface< dim > &	get_initial_topography_model () const

const GeometryModel::Interface< dim > &	get_geometry_model () const

const AdiabaticConditions::Interface< dim > &	get_adiabatic_conditions () const

bool	has_boundary_temperature () const

const BoundaryTemperature::Manager< dim > &	get_boundary_temperature_manager () const

const BoundaryHeatFlux::Interface< dim > &	get_boundary_heat_flux () const

bool	has_boundary_composition () const

const BoundaryComposition::Manager< dim > &	get_boundary_composition_manager () const

const BoundaryTraction::Manager< dim > &	get_boundary_traction_manager () const

std::shared_ptr< const InitialTemperature::Manager< dim > >	get_initial_temperature_manager_pointer () const

const InitialTemperature::Manager< dim > &	get_initial_temperature_manager () const

std::shared_ptr< const InitialComposition::Manager< dim > >	get_initial_composition_manager_pointer () const

const InitialComposition::Manager< dim > &	get_initial_composition_manager () const

const std::set< types::boundary_id > &	get_fixed_temperature_boundary_indicators () const

const std::set< types::boundary_id > &	get_fixed_heat_flux_boundary_indicators () const

const std::set< types::boundary_id > &	get_fixed_composition_boundary_indicators () const

const std::set< types::boundary_id > &	get_mesh_deformation_boundary_indicators () const

const BoundaryVelocity::Manager< dim > &	get_boundary_velocity_manager () const

const HeatingModel::Manager< dim > &	get_heating_model_manager () const

const MeshRefinement::Manager< dim > &	get_mesh_refinement_manager () const

const MeltHandler< dim > &	get_melt_handler () const

const VolumeOfFluidHandler< dim > &	get_volume_of_fluid_handler () const

const NewtonHandler< dim > &	get_newton_handler () const

const MeshDeformation::MeshDeformationHandler< dim > &	get_mesh_deformation_handler () const

const LateralAveraging< dim > &	get_lateral_averaging () const

const AffineConstraints< double > &	get_current_constraints () const

bool	simulator_is_past_initialization () const

double	get_pressure_scaling () const

bool	pressure_rhs_needs_compatibility_modification () const

bool	model_has_prescribed_stokes_solution () const

TableHandler &	get_statistics_object () const

const Postprocess::Manager< dim > &	get_postprocess_manager () const

unsigned int	n_particle_managers () const

const Particle::Manager< dim > &	get_particle_manager (const unsigned int particle_manager_index) const

Particle::Manager< dim > &	get_particle_manager (const unsigned int particle_manager_index)

bool	is_stokes_matrix_free ()

const StokesMatrixFreeHandler< dim > &	get_stokes_matrix_free () const

RotationProperties< dim >	compute_net_angular_momentum (const bool use_constant_density, const LinearAlgebra::BlockVector &solution, const bool limit_to_top_faces=false) const

Static Public Member Functions
static void	declare_parameters (ParameterHandler &prm)

Static Public Member Functions inherited from aspect::SimulatorAccess< dim >
static void	get_composition_values_at_q_point (const std::vector< std::vector< double >> &composition_values, const unsigned int q, std::vector< double > &composition_values_at_q_point)

Private Types
enum	formats { perplex, hefesto }

Private Member Functions
void	evaluate_thermal_enthalpy_derivatives (const MaterialModel::MaterialModelInputs< dim > &in, std::vector< MaterialModel::EquationOfStateOutputs< dim >> &eos_outputs) const

std::array< std::pair< double, unsigned int >, 2 >	enthalpy_derivatives (const typename Interface< dim >::MaterialModelInputs &in) const

void	fill_seismic_velocities (const MaterialModel::MaterialModelInputs< dim > &in, const std::vector< double > &composite_densities, const std::vector< std::vector< double >> &volume_fractions, SeismicAdditionalOutputs< dim > *seismic_out) const

void	fill_phase_volume_fractions (const MaterialModel::MaterialModelInputs< dim > &in, const std::vector< std::vector< double >> &volume_fractions, NamedAdditionalMaterialOutputs< dim > *phase_volume_fractions_out) const

void	fill_dominant_phases (const MaterialModel::MaterialModelInputs< dim > &in, const std::vector< std::vector< double >> &volume_fractions, PhaseOutputs< dim > &dominant_phases_out) const

Private Attributes
unsigned int	n_material_lookups

bool	use_bilinear_interpolation

bool	latent_heat

std::string	data_directory

std::vector< std::string >	material_file_names

std::vector< std::string >	derivatives_file_names

unsigned int	max_latent_heat_substeps

enum aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup::formats	material_file_format

std::vector< std::unique_ptr< MaterialModel::MaterialUtilities::Lookup::MaterialLookup > >	material_lookup

std::vector< std::string >	unique_phase_names

std::vector< std::vector< unsigned int > >	unique_phase_indices

std::vector< std::string >	list_of_dominant_phases

std::vector< std::vector< unsigned int > >	global_index_of_lookup_phase

Detailed Description

template<int dim>
class aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >

An equation of state class that reads thermodynamic properties from pressure-temperature tables in input files. These input files can be created using codes such as Perple_X or HeFESTo.

Definition at line 43 of file thermodynamic_table_lookup.h.

Member Enumeration Documentation

§ formats

template<int dim>

enum aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup::formats

private

The format of the provided material files. Currently we support the Perple_X and HeFESTo data formats.

Enumerator
perplex
hefesto

Definition at line 127 of file thermodynamic_table_lookup.h.

Member Function Documentation

§ initialize()

template<int dim>

void aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >::initialize ( )

Initialization function. Loads the material data and sets up pointers.

§ number_of_lookups()

template<int dim>

virtual unsigned int aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >::number_of_lookups ( ) const

virtual

Returns the number of lookups

§ is_compressible()

template<int dim>

bool aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >::is_compressible ( ) const

Return whether the model is compressible or not. Incompressibility does not necessarily imply that the density is constant; rather, it may still depend on temperature or pressure. In the current context, compressibility means whether we should solve the continuity equation as \(\nabla \cdot (\rho \mathbf u)=0\) (compressible Stokes) or as \(\nabla \cdot \mathbf{u}=0\) (incompressible Stokes).

§ evaluate()

template<int dim>

void aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >::evaluate	(	const MaterialModel::MaterialModelInputs< dim > &	in,
		std::vector< MaterialModel::EquationOfStateOutputs< dim >> &	eos_outputs
	)		const

Function to compute the thermodynamic properties in out given the inputs in in over all evaluation points. This function also fills the mass_fraction and volume_fraction vectors.

§ fill_additional_outputs()

template<int dim>

void aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >::fill_additional_outputs	(	const MaterialModel::MaterialModelInputs< dim > &	in,
		const std::vector< std::vector< double >> &	volume_fractions,
		MaterialModel::MaterialModelOutputs< dim > &	out
	)		const

Function to fill the seismic velocity and phase volume additional outputs

§ declare_parameters()

template<int dim>

static void aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >::declare_parameters ( ParameterHandler & prm )

static

Declare the parameters this class takes through input files.

§ parse_parameters()

template<int dim>

void aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >::parse_parameters ( ParameterHandler & prm )

Read the parameters this class declares from the parameter file.

§ create_additional_named_outputs()

template<int dim>

void aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >::create_additional_named_outputs ( MaterialModel::MaterialModelOutputs< dim > & out ) const

§ get_material_lookup()

template<int dim>

const MaterialModel::MaterialUtilities::Lookup::MaterialLookup& aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >::get_material_lookup ( unsigned int lookup_index ) const

§ evaluate_thermal_enthalpy_derivatives()

template<int dim>

void aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >::evaluate_thermal_enthalpy_derivatives	(	const MaterialModel::MaterialModelInputs< dim > &	in,
		std::vector< MaterialModel::EquationOfStateOutputs< dim >> &	eos_outputs
	)		const

private

Compute the specific heat and thermal expansivity using the pressure and temperature derivatives of the specific enthalpy. This evaluation incorporates the effects of latent heat production.

§ enthalpy_derivatives()

template<int dim>

std::array<std::pair<double, unsigned int>,2> aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >::enthalpy_derivatives ( const typename Interface< dim >::MaterialModelInputs & in ) const

private

Returns the cell-wise averaged enthalpy derivatives for the evaluate function and postprocessors. The function returns two pairs, the first one represents the temperature derivative, the second one the pressure derivative. The first member of each pair is the derivative, the second one the number of vertex combinations the function could use to compute the derivative. The second member is useful to handle the case no suitable combination of vertices could be found (e.g. if the temperature and pressure on all vertices of the current cell is identical.

§ fill_seismic_velocities()

template<int dim>

void aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >::fill_seismic_velocities	(	const MaterialModel::MaterialModelInputs< dim > &	in,
		const std::vector< double > &	composite_densities,
		const std::vector< std::vector< double >> &	volume_fractions,
		SeismicAdditionalOutputs< dim > *	seismic_out
	)		const

private

§ fill_phase_volume_fractions()

template<int dim>

void aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >::fill_phase_volume_fractions	(	const MaterialModel::MaterialModelInputs< dim > &	in,
		const std::vector< std::vector< double >> &	volume_fractions,
		NamedAdditionalMaterialOutputs< dim > *	phase_volume_fractions_out
	)		const

private

This function uses the MaterialModelInputs &in to fill the output_values of the phase_volume_fractions_out output object with the volume fractions of each of the unique phases at each of the evaluation points. These volume fractions are obtained from the Perple_X- or HeFESTo-derived pressure-temperature lookup tables. The filled output_values object is a vector of vector<double>; the outer vector is expected to have a size that equals the number of unique phases, the inner vector is expected to have a size that equals the number of evaluation points.

§ fill_dominant_phases()

template<int dim>

void aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >::fill_dominant_phases	(	const MaterialModel::MaterialModelInputs< dim > &	in,
		const std::vector< std::vector< double >> &	volume_fractions,
		PhaseOutputs< dim > &	dominant_phases_out
	)		const

private

This function uses the MaterialModelInputs &in to fill the output_values of the dominant_phases_out output object with the index of the dominant phase at each of the evaluation points. The phases are obtained from the Perple_X- or HeFESTo-derived pressure-temperature lookup tables. The filled output_values object is a vector of vector<unsigned int>; the outer vector is expected to have a size of 1, the inner vector is expected to have a size that equals the number of evaluation points.

Member Data Documentation

§ n_material_lookups

template<int dim>

unsigned int aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >::n_material_lookups

private

Definition at line 106 of file thermodynamic_table_lookup.h.

§ use_bilinear_interpolation

template<int dim>

bool aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >::use_bilinear_interpolation

private

Definition at line 107 of file thermodynamic_table_lookup.h.

§ latent_heat

template<int dim>

bool aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >::latent_heat

private

Definition at line 108 of file thermodynamic_table_lookup.h.

§ data_directory

template<int dim>

std::string aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >::data_directory

private

Information about the location of data files.

Definition at line 113 of file thermodynamic_table_lookup.h.

§ material_file_names

template<int dim>

std::vector<std::string> aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >::material_file_names

private

Definition at line 114 of file thermodynamic_table_lookup.h.

§ derivatives_file_names

template<int dim>

std::vector<std::string> aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >::derivatives_file_names

private

Definition at line 115 of file thermodynamic_table_lookup.h.

§ max_latent_heat_substeps

template<int dim>

unsigned int aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >::max_latent_heat_substeps

private

The maximum number of substeps over the temperature pressure range to calculate the averaged enthalpy gradient over a cell

Definition at line 121 of file thermodynamic_table_lookup.h.

§ material_file_format

template<int dim>

enum aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup::formats aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >::material_file_format

private

§ material_lookup

template<int dim>

std::vector<std::unique_ptr<MaterialModel::MaterialUtilities::Lookup::MaterialLookup> > aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >::material_lookup

private

List of pointers to objects that read and process data we get from material data files. There is one pointer/object per lookup file.

Definition at line 137 of file thermodynamic_table_lookup.h.

§ unique_phase_names

template<int dim>

std::vector<std::string> aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >::unique_phase_names

private

Vector of strings containing the names of the unique phases in all the material lookups.

Definition at line 142 of file thermodynamic_table_lookup.h.

§ unique_phase_indices

template<int dim>

std::vector<std::vector<unsigned int> > aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >::unique_phase_indices

private

Vector of vector of unsigned ints which constitutes mappings between lookup phase name vectors and unique_phase_names. The element unique_phase_indices[i][j] contains the index of phase name j from lookup i as it is found in unique_phase_names.

Definition at line 150 of file thermodynamic_table_lookup.h.

§ list_of_dominant_phases

template<int dim>

std::vector<std::string> aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >::list_of_dominant_phases

private

Vector of strings containing the names of the dominant phases in all the material lookups. In case the lookup table contains one string with the dominant phase rather than separate columns with volume fraction for each phase, this vector will be used instead of the unique_phase_names vector above.

Definition at line 158 of file thermodynamic_table_lookup.h.

§ global_index_of_lookup_phase

template<int dim>

std::vector<std::vector<unsigned int> > aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >::global_index_of_lookup_phase

private

Each lookup table reads in their own dominant phases and assigns indices based on all phases in that particular lookup. Since a model can have more than one lookup, it might have more phases than present in each lookup. We want to output unique/consistent indices for each phase, so we have to convert the indices of a phase in the individual lookup to the index in the global list of phases. This vector of vectors of unsigned int stores the global index for each lookup (so there are as many inner vectors as lookups, and each one stores the indices for an individual lookup, to be filled in the initialize function).

In case the lookup table contains one string with the dominant phase rather than separate columns with volume fraction for each phase, this vector will be used instead of the unique_phase_indices vector above.

Definition at line 174 of file thermodynamic_table_lookup.h.

The documentation for this class was generated from the following file:

/home/bob/source/include/aspect/material_model/equation_of_state/thermodynamic_table_lookup.h

Public Member Functions

Static Public Member Functions

Private Types

Private Member Functions

Private Attributes

Detailed Description

template<int dim> class aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >

Member Enumeration Documentation

§ formats

Member Function Documentation

§ initialize()

§ number_of_lookups()

§ is_compressible()

§ evaluate()

§ fill_additional_outputs()

§ declare_parameters()

§ parse_parameters()

§ create_additional_named_outputs()

§ get_material_lookup()

§ evaluate_thermal_enthalpy_derivatives()

§ enthalpy_derivatives()

§ fill_seismic_velocities()

§ fill_phase_volume_fractions()

§ fill_dominant_phases()

Member Data Documentation

§ n_material_lookups

§ use_bilinear_interpolation

§ latent_heat

§ data_directory

§ material_file_names

§ derivatives_file_names

§ max_latent_heat_substeps

§ material_file_format

§ material_lookup

§ unique_phase_names

§ unique_phase_indices

§ list_of_dominant_phases

§ global_index_of_lookup_phase

template<int dim>
class aspect::MaterialModel::EquationOfState::ThermodynamicTableLookup< dim >