ASPECT
interface.h
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1 /*
2  Copyright (C) 2011 - 2024 by the authors of the ASPECT code.
3 
4  This file is part of ASPECT.
5 
6  ASPECT is free software; you can redistribute it and/or modify
7  it under the terms of the GNU General Public License as published by
8  the Free Software Foundation; either version 2, or (at your option)
9  any later version.
10 
11  ASPECT is distributed in the hope that it will be useful,
12  but WITHOUT ANY WARRANTY; without even the implied warranty of
13  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
14  GNU General Public License for more details.
15 
16  You should have received a copy of the GNU General Public License
17  along with ASPECT; see the file LICENSE. If not see
18  <http://www.gnu.org/licenses/>.
19 */
20 
21 
22 #ifndef _aspect_mesh_deformation_interface_h
23 #define _aspect_mesh_deformation_interface_h
24 
25 #include <aspect/plugins.h>
27 #include <aspect/global.h>
28 
29 #include <deal.II/fe/fe_system.h>
30 #include <deal.II/dofs/dof_handler.h>
31 #include <deal.II/lac/affine_constraints.h>
32 #include <deal.II/base/index_set.h>
33 #include <deal.II/base/mg_level_object.h>
34 #include <deal.II/lac/la_parallel_vector.h>
35 #include <deal.II/multigrid/mg_constrained_dofs.h>
36 #include <deal.II/multigrid/mg_transfer_matrix_free.h>
37 #include <deal.II/multigrid/mg_transfer_global_coarsening.templates.h>
39 
40 namespace aspect
41 {
42  namespace Assemblers
43  {
50  template <int dim>
52  public SimulatorAccess<dim>
53  {
54  public:
55  ApplyStabilization(const double stabilization_theta);
56 
57  void
60 
61  private:
67  const double free_surface_theta;
68  };
69  }
70 
71  template <int dim> class Simulator;
72 
77  namespace MeshDeformation
78  {
88  template <int dim>
90  {
91  public:
95  virtual bool needs_surface_stabilization() const;
96 
97 
105  virtual
106  Tensor<1,dim>
107  compute_initial_deformation_on_boundary(const types::boundary_id boundary_indicator,
108  const Point<dim> &position) const;
109 
110 
121  virtual
122  void
123  compute_initial_deformation_as_constraints(const Mapping<dim> &mapping,
124  const DoFHandler<dim> &mesh_deformation_dof_handler,
125  const types::boundary_id boundary_indicator,
126  AffineConstraints<double> &constraints) const;
127 
135  virtual
136  void
137  compute_velocity_constraints_on_boundary(const DoFHandler<dim> &mesh_deformation_dof_handler,
138  AffineConstraints<double> &mesh_velocity_constraints,
139  const std::set<types::boundary_id> &boundary_ids) const;
140  };
141 
142 
143 
149  template <int dim>
150  class MeshDeformationHandler: public SimulatorAccess<dim>
151  {
152  public:
160 
164  ~MeshDeformationHandler() override;
165 
171  void initialize();
172 
177  void set_assemblers(const SimulatorAccess<dim> &simulator_access,
178  aspect::Assemblers::Manager<dim> &assemblers) const;
179 
184  void update();
185 
193  void execute();
194 
199  void setup_dofs();
200 
204  static
205  void declare_parameters (ParameterHandler &prm);
206 
210  void parse_parameters (ParameterHandler &prm);
211 
216  template <class Archive>
217  void save (Archive &ar,
218  const unsigned int version) const;
219 
224  template <class Archive>
225  void load (Archive &ar,
226  const unsigned int version);
227 
228  BOOST_SERIALIZATION_SPLIT_MEMBER()
229 
230 
247  static
248  void
249  register_mesh_deformation
250  (const std::string &name,
251  const std::string &description,
252  void (*declare_parameters_function) (ParameterHandler &),
253  std::unique_ptr<Interface<dim>> (*factory_function) ());
254 
259  const std::map<types::boundary_id, std::vector<std::string>> &
260  get_active_mesh_deformation_names () const;
261 
266  const std::map<types::boundary_id,std::vector<std::unique_ptr<Interface<dim>>>> &
267  get_active_mesh_deformation_models () const;
268 
273  const std::set<types::boundary_id> &
274  get_active_mesh_deformation_boundary_indicators () const;
275 
281  const std::set<types::boundary_id> &
282  get_tangential_velocity_with_active_mesh_deformation_boundary_indicators () const;
283 
289  const std::set<types::boundary_id> &
290  get_tangential_velocity_without_active_mesh_deformation_boundary_indicators () const;
291 
296  const std::set<types::boundary_id> &
297  get_boundary_indicators_requiring_stabilization () const;
298 
304  const std::set<types::boundary_id> &
305  get_free_surface_boundary_indicators () const;
306 
310  double get_free_surface_theta () const;
311 
326  const LinearAlgebra::Vector &
327  get_initial_topography () const;
328 
333  const LinearAlgebra::Vector &
334  get_mesh_displacements () const;
335 
339  const DoFHandler<dim> &
340  get_mesh_deformation_dof_handler () const;
341 
351  template <typename MeshDeformationType,
352  typename = typename std::enable_if_t<std::is_base_of<Interface<dim>,MeshDeformationType>::value>>
353  bool
354  has_matching_mesh_deformation_object () const;
355 
367  template <typename MeshDeformationType,
368  typename = typename std::enable_if_t<std::is_base_of<Interface<dim>,MeshDeformationType>::value>>
369  const MeshDeformationType &
370  get_matching_mesh_deformation_object () const;
371 
372 
378  const Mapping<dim> &
379  get_level_mapping(const unsigned int level) const;
380 
390  static
391  void
392  write_plugin_graph (std::ostream &output_stream);
393 
397  DeclException1 (ExcMeshDeformationNameNotFound,
398  std::string,
399  << "Could not find entry <"
400  << arg1
401  << "> among the names of registered mesh deformation objects.");
402 
403  private:
411  void make_initial_constraints ();
412 
425  void make_constraints ();
426 
431  void compute_mesh_displacements ();
432 
437  void compute_mesh_displacements_gmg ();
438 
447  unsigned int get_mapping_degree () const;
448 
454  template <unsigned int mesh_deformation_fe_degree>
455  void compute_mesh_displacements_gmg_for_degree();
456 
472  void set_initial_topography ();
473 
477  void interpolate_mesh_velocity ();
478 
482  void update_multilevel_deformation ();
483 
489 
494  const FESystem<dim> mesh_deformation_fe;
495 
500 
507 
515 
520 
530 
540 
545 
550 
555  AffineConstraints<double> mesh_velocity_constraints;
556 
561  AffineConstraints<double> mesh_vertex_constraints;
562 
567  std::map<types::boundary_id,std::vector<std::unique_ptr<Interface<dim>>>> mesh_deformation_objects;
568 
573  std::map<types::boundary_id, std::vector<std::string>> mesh_deformation_object_names;
574 
581 
588 
595 
601 
608  std::set<types::boundary_id> zero_mesh_deformation_boundary_indicators;
609 
615  std::set<types::boundary_id> free_surface_boundary_indicators;
616 
621  std::set<types::boundary_id> boundary_indicators_requiring_stabilization;
622 
624 
633 
638 
643 
647  MGLevelObject<std::unique_ptr<Mapping<dim>>> level_mappings;
648 
652  MGLevelObject<::LinearAlgebra::distributed::Vector<double>> level_displacements;
653 
658 
662  MGConstrainedDoFs mg_constrained_dofs;
663 
664  friend class Simulator<dim>;
665  friend class SimulatorAccess<dim>;
666  };
667 
668 
669  template <int dim>
670  template <class Archive>
672  const unsigned int) const
673  {
674  // let all the mesh deformation plugins save their data in a map and then
675  // serialize that
676  //TODO: for now we assume the same plugins are active before and after restart.
677  std::map<std::string,std::string> saved_text;
678  for (const auto &boundary_id_and_mesh_deformation_objects : mesh_deformation_objects)
679  for (const auto &p : boundary_id_and_mesh_deformation_objects.second)
680  p->save (saved_text);
681 
682  ar &saved_text;
683  }
684 
685 
686  template <int dim>
687  template <class Archive>
689  const unsigned int)
690  {
691  // get the map back out of the stream; then let the mesh deformation plugins
692  // that we currently have get their data from there. note that this
693  // may not be the same set ofmesh deformation plugins we had when we saved
694  // their data
695  std::map<std::string,std::string> saved_text;
696  ar &saved_text;
697 
698  for (const auto &boundary_id_and_mesh_deformation_objects : mesh_deformation_objects)
699  for (const auto &p : boundary_id_and_mesh_deformation_objects.second)
700  p->load (saved_text);
701  }
702 
703 
704 
705 
706  template <int dim>
707  template <typename MeshDeformationType, typename>
708  inline
709  bool
711  {
712  for (const auto &object_iterator : mesh_deformation_objects)
713  for (const auto &p : object_iterator.second)
714  if (Plugins::plugin_type_matches<MeshDeformationType>(*p))
715  return true;
716 
717  return false;
718  }
719 
720 
721 
722  template <int dim>
723  template <typename MeshDeformationType, typename>
724  inline
725  const MeshDeformationType &
727  {
728  AssertThrow(has_matching_mesh_deformation_object<MeshDeformationType> (),
729  ExcMessage("You asked MeshDeformation::MeshDeformationHandler::get_matching_mesh_deformation_object() for a "
730  "mesh deformation object of type <" + boost::core::demangle(typeid(MeshDeformationType).name()) + "> "
731  "that could not be found in the current model. Activate this "
732  "mesh deformation in the input file."));
733 
734  for (const auto &object_iterator : mesh_deformation_objects)
735  for (const auto &p : object_iterator.second)
736  if (Plugins::plugin_type_matches<MeshDeformationType>(*p))
737  return Plugins::get_plugin_as_type<MeshDeformationType>(*p);
738 
739  // We will never get here, because we had the Assert above. Just to avoid warnings.
740  typename std::vector<std::unique_ptr<Interface<dim>>>::const_iterator mesh_def;
741  return Plugins::get_plugin_as_type<MeshDeformationType>(*(*mesh_def));
742 
743  }
744 
745 
752  template <int dim>
753  std::string
755 
756 
757 
765 #define ASPECT_REGISTER_MESH_DEFORMATION_MODEL(classname,name,description) \
766  template class classname<2>; \
767  template class classname<3>; \
768  namespace ASPECT_REGISTER_MESH_DEFORMATION_MODEL_ ## classname \
769  { \
770  aspect::internal::Plugins::RegisterHelper<aspect::MeshDeformation::Interface<2>,classname<2>> \
771  dummy_ ## classname ## _2d (&aspect::MeshDeformation::MeshDeformationHandler<2>::register_mesh_deformation, \
772  name, description); \
773  aspect::internal::Plugins::RegisterHelper<aspect::MeshDeformation::Interface<3>,classname<3>> \
774  dummy_ ## classname ## _3d (&aspect::MeshDeformation::MeshDeformationHandler<3>::register_mesh_deformation, \
775  name, description); \
776  }
777  }
778 }
779 
780 #endif
virtual void parse_parameters(ParameterHandler &prm)
::TrilinosWrappers::MPI::BlockVector BlockVector
Definition: global.h:301
ApplyStabilization(const double stabilization_theta)
std::set< types::boundary_id > prescribed_mesh_deformation_boundary_indicators
Definition: interface.h:580
MGTransferType< dim, double > mg_transfer
Definition: interface.h:657
std::set< types::boundary_id > tangential_velocity_without_prescribed_mesh_deformation_boundary_indicators
Definition: interface.h:594
MGLevelObject<::LinearAlgebra::distributed::Vector< double > > level_displacements
Definition: interface.h:652
void write_plugin_graph(std::ostream &output_stream)
std::set< types::boundary_id > boundary_indicators_requiring_stabilization
Definition: interface.h:621
::TrilinosWrappers::MPI::Vector Vector
Definition: global.h:295
AffineConstraints< double > mesh_velocity_constraints
Definition: interface.h:555
std::set< types::boundary_id > tangential_mesh_deformation_boundary_indicators
Definition: interface.h:600
AffineConstraints< double > mesh_vertex_constraints
Definition: interface.h:561
MGLevelObject< std::unique_ptr< Mapping< dim > > > level_mappings
Definition: interface.h:647
virtual void load(const std::map< std::string, std::string > &status_strings)
std::map< types::boundary_id, std::vector< std::string > > mesh_deformation_object_names
Definition: interface.h:573
LinearAlgebra::BlockVector mesh_velocity
Definition: interface.h:506
std::map< types::boundary_id, std::vector< std::unique_ptr< Interface< dim > > > > mesh_deformation_objects
Definition: interface.h:567
std::string get_valid_model_names_pattern()
std::set< types::boundary_id > tangential_velocity_with_prescribed_mesh_deformation_boundary_indicators
Definition: interface.h:587
void load(Archive &ar, const unsigned int version)
Definition: interface.h:688
void execute(internal::Assembly::Scratch::ScratchBase< dim > &scratch, internal::Assembly::CopyData::CopyDataBase< dim > &data) const override
virtual void save(std::map< std::string, std::string > &status_strings) const
::MGTransferMF< dim, NumberType > MGTransferType
Definition: compat.h:65
std::set< types::boundary_id > free_surface_boundary_indicators
Definition: interface.h:615
void save(Archive &ar, const unsigned int version) const
Definition: interface.h:671
std::set< types::boundary_id > zero_mesh_deformation_boundary_indicators
Definition: interface.h:608
static void declare_parameters(ParameterHandler &prm)
ObserverPointer< const Simulator< dim >, SimulatorAccess< dim > > simulator
DeclException1(ProbabilityFunctionNegative, Point< dim >,<< "Your probability density function in the particle generator " "returned a negative probability density for the following position: "<< arg1<< ". Please check your function expression.")